Publications

Total found: 113 records
Šimek M., Virtanen S., Krištůfek V., Simojoki A., Yli-Halla M. (2011) Evidence of rich microbial communities in the subsoil of a boreal acid sulphate soil conducive to greenhouse gas emissions Agriculture, Ecosystems and Environment 140: 113-122.
DOI: 10.1016/j.agee.2010.11.018
Andresen E., Lohscheider J., Šetlíková E., Adamska I., Šimek M., Küpper H. (2010) Acclimation of Trichodesmium erythraeum ISM101 to high and low irradiance analysed on the physiological, biophysical and biochemical level New Phytologist 185: 173-188.
DOI: 10.1111/j.1469-8137.2009.03068.x
Ascher J., Ceccherini M., Chroňáková A., Jirout J., Borgogni F., Elhottová D., Šimek M., Pietramellara G. (2010) Evaluation of the denaturing gradient gel electrophoresis-apparatus as a parameter influencing soil microbial community fingerprinting World Journal of Microbiology and Biotechnology 26: 1721-1726.
DOI: 10.1007/s11274-010-0349-z
Čuhel J., Šimek M., Laughlin R., Bru D., Cheneby D., Watson C., Philippot L. (2010) Insights into the effect of soil pH on N2O and N2 emissions and denitrifier community size and activity Applied and Environmental Microbiology 76: 1870-1878.
DOI: 10.1128/AEM.02484-09
Hrčková K., Šimek M., Hroužek P., Lukešová A. (2010) Biological Dinitrogen Fixation by Selected Soil Cyanobacteria as Affected by Strain Origin, Morphotype, and Light Conditions Folia Microbiologica 55: 467-473.
DOI: 10.1007/s12223-010-0078-6
Jirout J., Tříska J., Růžičková K., Vrchotová N., Šimek M., Elhottová D. (2010) The comparison of chromatographic methods for Ergosterol determination and their application in analysis of upland pasture soil [Porovnání chromatografických metod pro stanovení ergosterolu a jejich využití při analýze půdy podhorské pastviny] Chemicke Listy 104: 1053-1059.
Šimek M., Brůček P., Hynšt J. (2010) Diurnal fluxes of CO2 and N2O from cattle-impacted soil and implications for emission estimates Plant, Soil and Environment 56: 451-457.
Šimek M., Pižl V. (2010) Soil CO2 flux affected by Aporrectodea caliginosa earthworms Central European Journal of Biology 5: 364-370.
DOI: 10.2478/s11535-010-0017-1
Brůček P., Šimek M., Hynšt J. (2009) Long-term animal impact modifies potential production of N2O from pasture soil Biology and Fertility of Soils 1-10.
DOI: 10.1007/s00374-009-0402-y
Chroňáková A., Radl V., Čuhel J., Šimek M., Elhottová D., Engel M., Schloter M. (2009) Overwintering management on upland pasture causes shifts in an abundance of denitrifying microbial communities, their activity and N2O-reducing ability Soil Biology and Biochemistry 41: 1132-1138.
DOI: 10.1016/j.soilbio.2009.02.019
Frouz J., Šimek M. (2009) Short term and long term effects of bibionid (Diptera: Bibionidae) larvae feeding on microbial respiration and alder litter decomposition European Journal of Soil Biology 45: 192-197.
DOI: 10.1016/j.ejsobi.2008.09.012
Hynšt J., Šimek M. (2009) N2O emissions from low and moderately disturbed pasture soils-field tests of minimal and maximal N supply Plant and Soil 320: 195-207.
DOI: 10.1007/s11104-008-9884-x
Küpper H., Andresen E., Wiegert S., Šimek M., Leitenmaier B., Šetlík I. (2009) Reversible coupling of individual phycobiliprotein isoforms during state transitions in the cyanobacterium Trichodesmium analysed by single-cell fluorescence kinetic measurements Biochimica et Biophysica Acta - Bioenergetics 1787: 155-167.
DOI: 10.1016/j.bbabio.2009.01.001
Philippot L., Bru D., Saby N., Čuhel J., Arrouays D., Šimek M., Hallin S. (2009) Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree Environmental Microbiology 11: 3096-3104.
DOI: 10.1111/j.1462-2920.2009.02014.x
Philippot L., Čuhel J., Saby N., Chèneby D., Chroňáková A., Bru D., Arrouays D., Martin-Laurent F., Šimek M. (2009) Mapping field-scale spatial patterns of size and activity of the denitrifier community Environmental Microbiology 11: 1518-1526.
DOI: 10.1111/j.1462-2920.2009.01879.x
Šustr V., Šimek M. (2009) Methane release from millipedes and other soil invertebrates in Central Europe Soil Biology and Biochemistry 41: 1684-1688.
DOI: 10.1016/j.soilbio.2009.05.007
Hynšt J., Brůček P., Šimek M. (2007) Nitrous oxide emissions from cattle-impacted pasture soil amended with nitrate and glucose Biology and Fertility of Soils 43: 853-859.
DOI: 10.1007/s00374-007-0167-0
Hynšt J., Šimek M., Brůček P., Petersen S. (2007) High fluxes but different patterns of nitrous oxide and carbon dioxide emissions from soil in a cattle overwintering area Agriculture, Ecosystems and Environment 120: 269-279.
DOI: 10.1016/j.agee.2006.10.003
Radl V., Gattinger A., Chroňáková A., Němcová A., Čuhel J., Šimek M., Munch J., Schloter M., Elhottová D. (2007) Effects of cattle husbandry on abundance and activity of methanogenic archaea in upland soils ISME Journal 1: 443-452.
DOI: 10.1038/ismej.2007.60
Šimek M., Brůček P., Hynšt J., Uhlířová E., Petersen S. (2006) Effects of excretal returns and soil compaction on nitrous oxide emissions from a cattle overwintering area Agriculture, Ecosystems and Environment 112: 186-191.
DOI: 10.1016/j.agee.2005.08.018

CONTACT

Biology Centre CAS
Institute of Soil Biology and Biogeochemistry
Na Sádkách 702/7
370 05 České Budějovice

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